Hi-C Newswire

Hi-C Newswire

Comprehensive Real-Time News Feed for Hi-C.

Results 1 - 20 of 116 in Hi-C

  1. Cell-cycle dynamics of chromosomal organization at single-cell resolutionRead the original story

    1 hr ago | CiteULike

    ... interphase structures that accommodate transcription, gene silencing and DNA replication. Here we use single-cell Hi-C (high-resolution chromosome conformation capture) analysis to CiteULike organises scholarly (or academic) papers or literature and ...

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  2. Single-cell Hi-C bridges microscopy and genome-wide sequencing...Read the original story

    21 hrs ago | CiteULike

    ... of alternative configurations, some of which could be transiently stabilized and serve regulatory purposes. Single-cell Hi-C approaches provide an opportunity to analyze chromatin folding in rare cell types such as stem cells, tumor progenitors, ...

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  3. MrTADFinder: A network modularity based approach to identify...Read the original story

    Sunday Aug 13 | CiteULike

    Genome-wide proximity ligation based assays such as Hi-C have revealed that eukaryotic genomes are organized into structural units called topologically associating domains . From a visual examination of the chromosomal contact map, however, it is clear that the organization of the domains is not simple or obvious.

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  4. High Resolution Mapping of Chromatin Conformation in Cardiac Myocytes ...Read the original story

    Friday Aug 11 | Circulation

    ... Methods -To investigate the mechanisms of epigenomic function in the heart, genome-wide chromatin conformation capture (Hi-C) and DNA sequencing were performed in adult cardiac myocytes following development of pressure overload-induced hypertrophy. ...

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  5. McDonald's is Killing Orange Hi-C - and People are FuriousRead the original story w/Photo

    Wednesday Aug 9 | MSN Living

    While the replacement roll out started in May, it wasn't an immediate switch, as locations continued to serve up Hi-C until their stock was depleted. Are you a beauty product hoarder... like we are? Beatrice Copeland of Bea Organized shows us how to organize our products in just three steps! So, some people are still showing up to their local fast-food joint, eager for Hi-C, only to realize that it is no longer being served.

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  6. I Spent My Childhood in a Gas StationRead the original story w/Photo

    Tuesday Aug 8 | Car & Driver

    ... of melted nacho cheese straight out of the dispenser. Make it a meal with a 99-cent bag of Fritos, a fountain soda-half Hi-C orange, half Sprite, in a Styrofoam cup-and a King-Size Kit Kat for dessert. That's comfort food to me. That's home. I grew ...

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  7. Strategies for optimizing BioNano and Dovetail explored through a...Read the original story w/Photo

    Thursday Aug 3 | BioMed Central

    ... analyses also can be achieved by sequencing libraries produced from chromatin proximity ligation methods such as Hi-C [ ]. Dovetail Chicago libraries are similar to Hi-C but rely on library preparation from in vitro rather than in vivo reconstituted ...

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  8. New Microbe Found in Self-Fermenting BeerRead the original story

    Monday Jul 31 | Drudge Retort

    ... They were looking for some yeast to sequence -- and to taste some beer, if it came down to it. ... Using the Hi-C technique, the team identified a yeast belonging to the genus Pichia, which turned out to be a hybrid of a known species called P. ...

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  9. Hi-C as a tool for precise detection and characterisation of...Read the original story

    Sunday Jul 30 | CiteULike

    Hi-C as a tool for precise detection and characterisation of chromosomal rearrangements and copy number variation in human tumours. To insert individual citation into a bibliography in a word-processor, select your preferred citation style below and drag-and-drop it into the document.

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  10. MrTADFinder: A network modularity based approach to identify...Read the original story

    Friday Jul 28 | CiteULike

    To insert individual citation into a bibliography in a word-processor, select your preferred citation style below and drag-and-drop it into the document. Genome-wide proximity ligation based assays such as Hi-C have revealed that eukaryotic genomes are organized into structural units called topologically associating domains .

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  11. 3D Chromatin Structures of Mature Gametes and Structural Reprogramming during Mammalian EmbryogenesisRead the original story

    Thursday Jul 27 | CiteULike

    ... remains limited. We report the 3D chromatin architecture of mouse gametes and early embryos using an optimized Hi-C method with low-cell samples. We find that mature oocytes at the metaphase II stage do not have topologically associated domains ...

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  12. Get to Know the Tiffany Haddish, the Girls Trip Breakout Star That Everyone Is Talking AboutRead the original story w/Photo

    Friday Jul 21 | Popsugar

    ... you've seen her before. While Girls Trip might be her biggest project to date, Tiffany appeared in 2016's Keanu as Hi-C and has played Nekeisha on The Carmichael Show since 2015. She's also had smaller roles on shows like Real Housewives of ...

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  13. The whole-genome landscape of medulloblastoma subtypesRead the original story w/Photo

    Wednesday Jul 19 | Nature

    ... to SNCAIP -associated structural variants. NS, not significant. c , Summary of annotated chromatin interactions (Hi-C), TADs (brown bars), CTCF chromatin interaction analysis by paired-end tag sequencing (ChIA-PET) and CTCF binding orientation (red ...

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  14. cooler 0.7.5Read the original story

    Jul 13, 2017 | Python

    Cooler is a support library for a sparse, compressed, binary persistent storage format, called cool , used to store genomic interaction data, such as Hi-C contact matrices. The cool file format is a reference implementation of a genomic matrix data model using HDF5 as the container format.

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  15. Wild emmer genome architecture and diversity elucidate wheat evolution and domesticationRead the original story

    Jul 6, 2017 | Science

    Modern wheat, which underlies the diet of many across the globe, has a long history of selection and crosses among different species. Avni et al. used the Hi-C method of genome confirmation capture to assemble and annotate the wild allotetraploid wheat .

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  16. Whole-Genome Restriction Mapping by "Subhaploid"-Based RAD...Read the original story

    Jul 6, 2017 | Genetics current issue

    ... improvement of N50 (aS1 4816 kb-3.7 Mb) and high scaffolding accuracy (98.1-98.5%). RadMap outperforms BioNano and Hi-C when input assembly is highly fragmented (contig N50 = 54 kb). RadMap can capture wide-range contiguity information and provide ...

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  17. Bud Light Lime-a-Rita flavors, rankedRead the original story w/Photo

    Jul 6, 2017 | City Pages

    ... only in Michigan, Ohio, Florida, Texas, and Georgia. I can only hope the orange flavor tastes like Ghostbusters-themed Hi-C shot into a SodaStream and watered down with Karkov. For the record, I am not so Lime-a-Rita'd out that I'd turn it down if I ...

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  18. Genetic DJ: Growing cells remix their genesRead the original story w/Photo

    Jul 4, 2017 | EurekAlert!

    ... has relied on technology pioneered by Dr Nagano and colleagues in 2013. Combining this technology, called single-cell Hi-C, with statistical analyses performed by Dr Amos Tanay's team at the Weizmann Institute has made this detailed research ...

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  19. Mapping genes could improve cancer diagnosisRead the original story w/Photo

    Jul 3, 2017 | EurekAlert!

    ... of targeted treatments. The report, in the journal Genome Biology , outlines a new application of a technique called Hi-C, which allows scientists to map how genetic material is arranged inside cells. By analysing this information, researchers can ...

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  20. New technique to study genetic changes could enhance cancer diagnosisRead the original story w/Photo

    Jul 4, 2017 | Medical News

    ... use of targeted treatments. The report, in the journal Genome Biology, outlines a new application of a technique called Hi-C, which allows scientists to map how genetic material is arranged inside cells. By analyzing this information, researchers ...

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